PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0070s00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 413aa    MW: 45365.6 Da    PI: 4.4976
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0070s00070.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.58.1e-09108129223
               AP2   2 gykGVrwdkkrgrWvAeIrd.ps 23 
                       +ykGVr +k +g+W+AeIrd ++
  Vang0070s00070.1 108 KYKGVRMRK-WGKWAAEIRDpFK 129
                       8******99.**********554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.889108218IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-8108129IPR001471AP2/ERF domain
SMARTSM003800.0089108166IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-5108129IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MLEALNQSAK MMKKLKQKRN PFHDSKMTRK LRIICDDPDA TDSSSDEEEH FGNGRKVKRT  60
MVEIALPPVP VNSLVAAETS TESSNNEELN KKRVLAKNPS VKRQTCGKYK GVRMRKWGKW  120
AAEIRDPFKE SATDSKSATI DYSESSILSH TSPYSVLELD TSASNLTVSG KVSGNEVVET  180
KGLETEVAEI ETEGLKAESF EAEFAELDIP DLSMLSVPHP SAVASNAANV GAPSQFEFDW  240
FALDSLEHGF DEELGFDDDL AALEDIQIYG FDDGQPSELP DYDFDDIGAD EFADDVTRGE  300
VVVEIGEGDV GLSLRILLSK GMSEVVTTTG KLFQTSGDDE EQSKPRRPEV EPAIVVGHLD  360
MGTETTGAVV QWRGGEAKSS GERRGREVLR RDLGRRTVKV NKVLIFNPRT QL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006585851.13e-95PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_006585852.13e-95PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_006585853.13e-95PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A0L9UT791e-110A0A0L9UT79_PHAAN; Uncharacterized protein
TrEMBLA0A0S3T2G61e-110A0A0S3T2G6_PHAAN; Uncharacterized protein
STRINGGLYMA08G30716.11e-94(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.27e-27ERF family protein